Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903615.1_cds_XP_016453708.1_47807
CDS Infomation

[gene=LOC107778040] [db_xref=GeneID:107778040] [protein=protein SENSITIVITY TO RED LIGHT REDUCED 1-like] [protein_id=XP_016453708.1] [location=join(17192..17912,18008..18071,18435..18945)] [gbkey=CDS]
Sequence

ATGAATCACGGTGAGAATATGGAGTCCAATATTGATTATCACATACAAGATGAGGCGGAA
AGGCTGCTTAAAGAGATTGAACTGATGACGAAGAATGTTGAGAACTCTAAATTATATGCT
GAATTGTGCTTCGATCTCGAACAGAATGAAACAATTCAACAACATCTGTTTCGCCATTTA
GGCTCCCATTCATGCATTCAGCTGGTAATCTATTCTTTGGGAAGCATGGAATACAGTTTT
CATTCACAGTTTCAGCTTGCCATAGTTCTCCTACTAAAACGAGATTTTTCCAATCTGATT
GGCAATATAGAAGTATATGATCCTGCAATGTCTCCCGCTGATATCATAGTTTTCAAGGAA
CTCGGTTTTGAGGTTCTAACCATTGATGAAAACTGTAAGAGGCAAGTCCAGAAACCAACA
ATGTTCTACATGCCTTATCCTAATTATAATCTTATCGGCAACCTGCTAGGAGCAAACTGG
TCTTCGTCTTGTATCAACCAGATTTTTCTACTGACAAACTCATTTCGCAGTACATTGAAC
GTTATTCGACAGTGTGATTTTAGTGGAGAAACTGTGCAACGTCTAGAGAGAATTCTCGGG
TTCACAACAGAAATTGACATACAAACTAGCTATGACATGATGTATATTAGTTTGTTCTCA
GTATTTGCTTGGCATTTCTTTGATGTGGATCCCAACGTTGACATGGAAACTTCACTGCCT
GTGACTGAAATTACAGAATATAAAAGAGACGTCAAACTGGGACGTTCTTGGTTGGATATG
CAAAGGTGTCTTGAAGAAAATCTTTTGGAATATATGCAAAGTGATATGACTAGTGAGGAA
TTTGCGCAAATTCTTGGTGAACATCGTGGGCCTCGTCATTTAAGATGCAACTCAGTTCCT
CCTCCTCCAGGTTGGATTAAGCTAAACATCTATGGAATTGGTACAAAGGGTGATCAGCCA
GGACGATATAGTGGCGCCTTTCAAGATGAAACTGGAATGTGTTTAGGTAGGTATAGTGGT
ACCATTCATGTTGACGACAATGTGATTGCTGGACTGGAGGCCTTGAGGCAGGGATTGATC
AGATGCACGGAAGGAAAGCCGAATGCAAAAAAGTTGATTGTGGAGTCCGATAATTTTATA
CTTGTCCAATTTGTTAATCGTCGCCCTGAGCCAAAAGAAATAACCATGTGCAGGTTGAAA
GAAATTTTTGGTTTGATGAAGCGTATAACTTGTGCAATTTACCATGTGTATGAAGAAGCC
AATGAAGCTGCTAGACTTGGCTCTGATGAGAGATGA

Peptide Sequence

PEP ID

XP_016453708.1
PEP Infomation

PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Nicotiana tabacum]
Sequence

MNHGENMESNIDYHIQDEAERLLKEIELMTKNVENSKLYAELCFDLEQNETIQQHLFRHL
GSHSCIQLVIYSLGSMEYSFHSQFQLAIVLLLKRDFSNLIGNIEVYDPAMSPADIIVFKE
LGFEVLTIDENCKRQVQKPTMFYMPYPNYNLIGNLLGANWSSSCINQIFLLTNSFRSTLN
VIRQCDFSGETVQRLERILGFTTEIDIQTSYDMMYISLFSVFAWHFFDVDPNVDMETSLP
VTEITEYKRDVKLGRSWLDMQRCLEENLLEYMQSDMTSEEFAQILGEHRGPRHLRCNSVP
PPPGWIKLNIYGIGTKGDQPGRYSGAFQDETGMCLGRYSGTIHVDDNVIAGLEALRQGLI
RCTEGKPNAKKLIVESDNFILVQFVNRRPEPKEITMCRLKEIFGLMKRITCAIYHVYEEA
NEAARLGSDER

Transcript Sequence

Gene sequence data has not been registered.